Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., Transcriptional regulator from Pseudomonas stutzeri RCH2

 Score =  188 bits (477), Expect = 2e-52
 Identities = 106/289 (36%), Positives = 161/289 (55%), Gaps = 3/289 (1%)

Query: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61
           R   + +F +    GS S  A    ++ ++ SK +  LE  LGV+L +R+TR+L+LTEAG
Sbjct: 4   RITSMRVFTRAATAGSLSAAARHLDMSPAMASKHVDALESRLGVKLFHRSTRRLSLTEAG 63

Query: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121
              L   + +    +EA  +V       +G ++M+VP   G   +A  + EF   HP + 
Sbjct: 64  SNYLEACQRILPEIEEAEASVASQRIEATGLLRMNVPLTFGTQFIAPLIPEFSRRHPAVK 123

Query: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181
           V++ L +  VDL++GG+D+ +R G L+DSS+ AR + D   VVCA+P Y+   G P    
Sbjct: 124 VELGLTDSRVDLIDGGWDMAVRIGQLQDSSMQARQLADCPLVVCAAPRYLDERGVPRSVA 183

Query: 182 DLARHNCLQYAYQTTGATD-WEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVP 240
           DL +HNCL Y+     A   W F G  G   + V+G    +N  AL  AA+GG G+ Y P
Sbjct: 184 DLGQHNCLGYSLPNLAAAKVWPF-GRNGEVRIAVNGDLVANNGEALVAAAIGGQGLIYKP 242

Query: 241 RCLVYHDFRNGELVDVFPEQVGKKL-GIYAVYPFTRQPPNKVRLLIEHI 288
           + +V    R GELV +  +Q    L GI+ VYP  R+PP KVR++I+++
Sbjct: 243 QFIVAKALRRGELVAIELDQPCVGLGGIHVVYPPDRRPPAKVRVMIDYL 291