Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 313 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella amazonensis SB2B

 Score =  168 bits (425), Expect = 2e-46
 Identities = 100/287 (34%), Positives = 157/287 (54%), Gaps = 1/287 (0%)

Query: 4   DDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKA 63
           + + +F  V   GSFS  A + G++ S VS ++A LE +LGVQL+ RTTR L+LTEAG  
Sbjct: 6   EPIAIFTHVARAGSFSAAARKLGISKSKVSTQVADLEHKLGVQLIQRTTRSLSLTEAGHL 65

Query: 64  LLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVD 123
           L    + + +   +A+ +V    +   G +K+ +    G + +  A+ EF   HP L + 
Sbjct: 66  LYVQGEELLRDADQAVASVHNLNDATRGVLKVGISQSFGTMHIIPALPEFMARHPELELQ 125

Query: 124 MSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDL 183
           +SL +  VD+V  G DL++         ++AR ++  Q+++ ASP YIAR+G+P +PE L
Sbjct: 126 VSLLDHKVDVVSEGLDLLLTMSEQLPLGMVARPLMKCQFLLVASPEYIARHGEPSRPEQL 185

Query: 184 ARHNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCL 243
             HNCL Y  +    + W+FK       + VSG F  DNA AL+ AA+ G G+ Y+   L
Sbjct: 186 VDHNCLVYHGEWHEHSVWQFKRGDDYCEIGVSGNFRVDNAPALKSAAVSGLGVVYLASYL 245

Query: 244 VYHDFRNGELVDVFPE-QVGKKLGIYAVYPFTRQPPNKVRLLIEHIR 289
           +  +   G LV +  + Q+   L + AVYP  +    KV   I+ I+
Sbjct: 246 MEDEINKGTLVPLLRDWQLTHHLPLQAVYPRRKHLAPKVSSFIDFIK 292