Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 301 a.a., HTH-type transcriptional regulator, LysR family from Phaeobacter inhibens DSM 17395

 Score =  172 bits (436), Expect = 8e-48
 Identities = 106/288 (36%), Positives = 161/288 (55%), Gaps = 2/288 (0%)

Query: 2   RADDLILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAG 61
           R  ++  F  V++ G F+  A++ G++ S VSK ++ LE  LG +LL RTTR+++ TE G
Sbjct: 3   RLTEMEAFANVVDQGGFTDAAKKMGISKSAVSKHVSSLEARLGARLLNRTTRRVSPTEIG 62

Query: 62  KALLHGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLT 121
            A    A+ V     EA   V       SG +++SV T  G   L+  +++F    P +T
Sbjct: 63  LAYYDRARRVLNDAGEADALVTSMQSAPSGLLRISVATDFGVNHLSPVLSDFLRDFPDIT 122

Query: 122 VDMSLDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPE 181
           V+M L+NR+V+L+  G+D+ +R G LEDSSL AR + ++   + ASPAY+ + G+P K +
Sbjct: 123 VNMVLNNRYVELISEGFDMALRIGELEDSSLRARKLTETTKRMIASPAYLEKFGRPQKID 182

Query: 182 DLARHNCLQYAYQTTGATDWEFKGAKG-NYIVKVSGTFSTDNATALRKAALGGHGIAYVP 240
           DL  H  L Y+ Q++G+  W+     G    V+ SG  S ++  +L  AA+ G GIAY+P
Sbjct: 183 DLNMHKLLHYSNQSSGSM-WKITAPSGEKRQVRTSGWLSVNDGQSLLNAAISGLGIAYLP 241

Query: 241 RCLVYHDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHI 288
             L       G + DV P    +  GIYAVYP  R    KVR  I+ +
Sbjct: 242 SYLYSDAMAEGLVEDVMPSLPMETQGIYAVYPPGRFTQPKVRAFIDFL 289