Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 299 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

 Score =  192 bits (488), Expect = 8e-54
 Identities = 106/282 (37%), Positives = 161/282 (57%), Gaps = 1/282 (0%)

Query: 8   LFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKALLHG 67
           LF  V+ELGSFS+ A + G+  S VSKR++ LE+ LGV+L+ RTTR+L LT+AG+     
Sbjct: 9   LFVSVVELGSFSEAARRLGINKSAVSKRISALEQALGVKLIQRTTRRLHLTDAGRQYYEY 68

Query: 68  AKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDMSLD 127
                   Q+A DA+      V G +K+S+P + G   +A  ++EF   +P + +++SLD
Sbjct: 69  VHQAAALMQQAQDALASQQGAVQGSLKVSLPNVFGQRHIAPLLSEFSRQYPTINLEVSLD 128

Query: 128 NRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLARHN 187
           +R VDL++ G D+V+R G L DSSL+A  +     ++CASP Y+A    P    DL  HN
Sbjct: 129 DRVVDLLKEGLDMVVRIGDLPDSSLVAVKLAPCHSLLCASPDYLAHQSHPRSLADLRGHN 188

Query: 188 CLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLVYHD 247
           CL Y+Y   G  +W F+       +K  G    +N+  +R+  L G GIA +PR LV  +
Sbjct: 189 CLFYSY-FRGGLEWSFERRGEVSRIKPRGNIKVNNSEVIRRLLLDGMGIALMPRYLVEEE 247

Query: 248 FRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHIR 289
              G LV V  +      GIYA+ P  +  P ++R+ I+ ++
Sbjct: 248 LAAGTLVPVLSDYQAPTHGIYALTPERQHMPARLRVFIDFLK 289