Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 289 a.a., transcriptional regulator, LysR family (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  162 bits (411), Expect = 6e-45
 Identities = 95/281 (33%), Positives = 153/281 (54%), Gaps = 7/281 (2%)

Query: 9   FYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKALLHGA 68
           F  V E  SF+K A+Q G++ + VS++++ LE  +  +L +RTTRK++++E G+      
Sbjct: 10  FVAVAEAESFTKAAKQLGISTAQVSRQVSALETRMATKLFHRTTRKVSVSEVGRIYYQHC 69

Query: 69  KNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDMSLDN 128
           + V    +EA  A+        G +K++ P   G+  L   V +F   +P L V ++L N
Sbjct: 70  RQVLDGLEEAERAITNLQSTPRGLLKITAPVTYGEKTLVPLVNDFIAKYPELEVKINLTN 129

Query: 129 RFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLARHNC 188
           + VDL++ GYDL IR G L+DSS++A+ +      VCASP Y++  G P    +L +HNC
Sbjct: 130 QKVDLIDDGYDLAIRLGQLKDSSIMAKRLGSRTQYVCASPDYVSTFGIPHSLSELEQHNC 189

Query: 189 LQYAYQTTGATD-WEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLVYHD 247
           L       G  D W F+       V+V G  + ++  AL  AA+ G GI  +P   V   
Sbjct: 190 L------LGTLDYWRFQENGKTRNVRVKGNLTCNSGYALVDAAIKGIGIIQLPEYYVLPF 243

Query: 248 FRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLIEHI 288
             +G+LV +  +    K GI+A+YP  R    KVR+L++++
Sbjct: 244 LEDGQLVPLLEQNRQPKEGIWALYPHNRHLSPKVRMLLDYL 284