Pairwise Alignments

Query, 299 a.a., LysR family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 298 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella sp. ANA-3

 Score =  224 bits (570), Expect = 2e-63
 Identities = 118/280 (42%), Positives = 170/280 (60%), Gaps = 1/280 (0%)

Query: 6   LILFYQVIELGSFSKVAEQNGLTNSVVSKRLARLEEELGVQLLYRTTRKLTLTEAGKALL 65
           L +F  V+E GSFS   ++ GL+ S +SKR+ +LE+ LG+QLL RTTR L+LT+AG    
Sbjct: 7   LPIFVTVVECGSFSAAGQKLGLSKSAISKRITQLEQHLGIQLLQRTTRSLSLTDAGARYF 66

Query: 66  HGAKNVKQATQEALDAVVGFGENVSGHIKMSVPTISGDLILADAVAEFCNLHPGLTVDMS 125
              +   Q TQE LDA+    +   G++++SVP + G L +A  +AEF   +P + + M 
Sbjct: 67  EYIRPAVQLTQEGLDAISELQQTPKGNLRISVPMVFGRLYIAPLIAEFLKRYPDIQLQMQ 126

Query: 126 LDNRFVDLVEGGYDLVIRTGYLEDSSLIARHILDSQWVVCASPAYIARNGKPLKPEDLAR 185
           +D++  DL+ GG+DL IR G L DSSLIAR I     V+CASPAY+A++G P+ P  L +
Sbjct: 127 MDDKTTDLIAGGFDLAIRIGELPDSSLIARKIAPCLSVICASPAYLAQHGSPMTPSGLTQ 186

Query: 186 HNCLQYAYQTTGATDWEFKGAKGNYIVKVSGTFSTDNATALRKAALGGHGIAYVPRCLVY 245
           HNCL Y+Y   G  +W F    G   V+  G +  +N+ A+ +A L G GIA +PR +V 
Sbjct: 187 HNCLFYSYFQDG-VEWSFHSPYGVQRVQPKGNYQVNNSDAIHQACLDGLGIANLPRFIVE 245

Query: 246 HDFRNGELVDVFPEQVGKKLGIYAVYPFTRQPPNKVRLLI 285
            D + G L  +  +    + GIYAVYP  +  P KV +LI
Sbjct: 246 SDLQAGRLQTILTDFPLPEHGIYAVYPQRKYLPTKVTVLI 285