Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ABC transporter (RefSeq) from Shewanella amazonensis SB2B

 Score =  220 bits (560), Expect = 2e-62
 Identities = 115/242 (47%), Positives = 157/242 (64%), Gaps = 6/242 (2%)

Query: 9   LWIPLLSLSAAFSV----KADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELV 64
           +W+ L+   A F V     A  + LTSL+WPPYSG+GL  +GA++AV KAA  AMG++L 
Sbjct: 17  MWLVLILSLAGFGVANGVNATVVRLTSLNWPPYSGQGLPSEGAAVAVAKAAFAAMGYQLE 76

Query: 65  VEFYPWSRAVHLA-KGEAKYSGYFPEYFFEDNSLLFSDSIGKGPLGFAENVANPIQWSVL 123
           V+FYPWSRAV LA +    Y GYFPEY+F+    +FS  +G  PLG  E+ + PI W  +
Sbjct: 77  VDFYPWSRAVKLAHQSNTPYVGYFPEYYFDTVQFVFSHPMGMSPLGLLEHKSRPISWVSV 136

Query: 124 EDLKPHTIGVVRDYINTPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFN 183
           +DL+ + +GVV+DY+NT ELD  IA     +  V SD  N++KVA GR+  AVID  V  
Sbjct: 137 KDLRNYRLGVVQDYVNTEELDRAIADDLQPAEQVTSDEFNIKKVAAGRIDAAVIDVYVMR 196

Query: 184 YLKNNDPSLAADKDQLQMNKQLLVEKDLHIAFRNDAQGQKWQAIVNEGLKKIDIEKIMNS 243
           YL      L    D++Q+N QLL  K+L+IAF+N  +G +WQAI NEGL++ID  +IM  
Sbjct: 197 YLLKQS-RLQGVADKVQINSQLLANKNLYIAFKNTPEGHRWQAIFNEGLQRIDAAEIMAD 255

Query: 244 YL 245
           +L
Sbjct: 256 HL 257