Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., extracellular solute-binding protein (RefSeq) from Shewanella loihica PV-4

 Score = 70.1 bits (170), Expect = 5e-17
 Identities = 54/163 (33%), Positives = 79/163 (48%), Gaps = 11/163 (6%)

Query: 27  LILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFYPWSRAVHLAKGEAK---- 82
           LI  S D+PP+    ++E G    +V+A  E  G+ L  EFYP+ RA  L K E      
Sbjct: 53  LISVSNDYPPFYSPQMSEWGVVYHLVEAVFEHAGYPLSHEFYPFIRAQTLIKRELADLII 112

Query: 83  YSGYFPEYFFEDNSLLFSDSIGKGPLGFAENVANPIQWSVLEDLKPHTIGVVRDYINTPE 142
              Y PE    +  + FSD +    +   +   + I +  ++DLKP+ IG+ R Y N   
Sbjct: 113 GVWYRPE---REQWIDFSDPLLSVSIRLYKRSDSKIVFRDIKDLKPYLIGIGRGYAN--- 166

Query: 143 LDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYL 185
                 Q  L + A +SD  NL+K+  GRV L +I  +V  YL
Sbjct: 167 -PVAFGQANLNTEAASSDAVNLRKLLAGRVDLVLICEDVARYL 208