Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., bacterial extracellular solute-binding proteins, family 3 (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 50/208 (24%), Positives = 85/208 (40%), Gaps = 30/208 (14%)

Query: 27  LILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFYPWSRA------------V 74
           +I T+  WPPY+       G ++ ++  A+   G+ + + + PW RA            +
Sbjct: 43  VIATADPWPPYADPAHPAHGLTLEILSLALGRSGYTVTMVYLPWVRAEQRLERGGVDLLI 102

Query: 75  HLAKGEAKYSGYFPEYFFEDNSLLFSDSIGKGPLGFAENVANPIQWSVLEDLKPHTIGVV 134
           +  + EA+   Y           LFS    +  L F +       ++  E LK  T+G +
Sbjct: 103 NCWRTEARAKRY-----------LFSRPFARNRLLFMQRAGESFVFAGQESLKGKTVGTI 151

Query: 135 RDYINTPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYLKNNDPSLAA 194
           R Y  T   D+ +A   +    V +   N++K+  GRV L + D  V    +     L A
Sbjct: 152 RGYGYT---DAFMADTSIRREEVTNFKDNVRKLVSGRVDLIIEDELV---ARTQLEQLPA 205

Query: 195 D-KDQLQMNKQLLVEKDLHIAFRNDAQG 221
           D   Q+   +  LV  DL++    D  G
Sbjct: 206 DLAGQVAFIEPPLVTNDLYVVAYPDNPG 233