Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., succinate dehydrogenase (ubiquinone) (RefSeq) from Shewanella sp. ANA-3

 Score =  229 bits (585), Expect = 3e-65
 Identities = 122/232 (52%), Positives = 158/232 (68%), Gaps = 5/232 (2%)

Query: 15  SLSAAFSVKADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFYPWSRAV 74
           ++++AFS   DTL LTSL WPPYSG+ LA++GAS+AV +AA E M  +LVV+FYPWSRA+
Sbjct: 8   TVNSAFS---DTLKLTSLLWPPYSGQQLAQQGASVAVAQAAFERMEQQLVVDFYPWSRAI 64

Query: 75  HLAK-GEAKYSGYFPEYFFEDNSLLFSDSIGKGPLGFAENVANPIQWSVLEDLKPHTIGV 133
            LA    + Y GYFPEY+FE +  +FS  IG  PLG  E  ++PI W  L DL  +T+GV
Sbjct: 65  KLAAMPSSDYIGYFPEYYFETDKFVFSKPIGISPLGIVEQKSHPISWHYLADLNRYTLGV 124

Query: 134 VRDYINTPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYLKNNDPSLA 193
           V+DY+NT  LD MIA G     AV SD QN++KVA GR+  AVID NV  YL    P L 
Sbjct: 125 VKDYVNTESLDLMIASGTQPVEAVTSDEQNIKKVAAGRIDGAVIDVNVLYYLL-KQPHLQ 183

Query: 194 ADKDQLQMNKQLLVEKDLHIAFRNDAQGQKWQAIVNEGLKKIDIEKIMNSYL 245
              D+LQ+NKQLL  K L+IAFRN  +G+ W+ + ++GL ++DIE IM   L
Sbjct: 184 PLADKLQVNKQLLANKQLYIAFRNTEEGRHWRDVFDQGLAQLDIESIMGELL 235