Pairwise Alignments

Query, 247 a.a., ABC transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., hypothetical protein (RefSeq) from Shewanella sp. ANA-3

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 61/180 (33%), Positives = 92/180 (51%), Gaps = 10/180 (5%)

Query: 9   LWIPLLSLSAAFSVKADTLILTSLDWPPYSGEGLAEKGASIAVVKAAVEAMGHELVVEFY 68
           L + LL LS       + L L + ++PP+    L ++G    VVK A +  G+   V+FY
Sbjct: 11  LVLQLLGLSTPCMAGRE-LTLVATNYPPFYTNELPDQGGVALVVKEAFKRRGYNASVKFY 69

Query: 69  PWSRAVHLAK-GEAKYSGYFPEYFFEDNSLL--FSDSIGKGPLGFAENVANPIQWSVLED 125
           P++RA  L K G+A   G    ++ ++      +SD I    + F +   NP+ +S L +
Sbjct: 70  PFARAALLVKTGQA--DGIIGLWYRKEREQWAHYSDPIQAVQIVFYKRKDNPLSFSQLTE 127

Query: 126 LKPHTIGVVRDYINTPELDSMIAQGQLLSSAVNSDVQNLQKVAKGRVPLAVIDSNVFNYL 185
           LKP TIG+ R Y N PE    IA   L +   NSD  NL+K+   R+ L +I  N+  YL
Sbjct: 128 LKPFTIGIGRGYANPPE----IAGAGLTTEEGNSDEMNLKKLFLKRIDLVLIGHNLAEYL 183