Pairwise Alignments

Query, 214 a.a., chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score = 58.9 bits (141), Expect = 2e-13
 Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 21/185 (11%)

Query: 11  VQIVFAVCAVLLALTVF--EYKKALNTFTNDLNLTVSNTLTRLQVNLPKPLWDFDLETVK 68
           VQI  A    ++   +F   Y  A +T  ++      NT+  LQV + +P++ +D E ++
Sbjct: 8   VQIGLAAAIFMIVSVLFGVSYWLASDTLASNEMAFEDNTVANLQVTMAQPIFTYDYEQIR 67

Query: 69  SAISAELKTPEISSIKITDTTGKAILYLTLDQATDDKGLRKTIAVENEGALAELASVSGE 128
           + +S  LK+ +I  I + D  GK +         +DK      A + +         + E
Sbjct: 68  AVLSVMLKSEQIYQITVVDHRGKLL--------AEDKQAEIVAASDLQ---------TRE 110

Query: 129 LEFVEYGKKNPLGSIEIRYSDEFMHQQLAEYVSFNLLKVLILAILIPCMLFIILNFSVLK 188
           L+F + G  NP G + I +S   +  QL++ +    L+ L++      ++FIIL   V+ 
Sbjct: 111 LQFSDQG--NPTGRLTIAFSTLPVKAQLSDLLLGYFLQALLILAGSLLVIFIILKRLVIS 168

Query: 189 PLNEL 193
           PL+++
Sbjct: 169 PLDKV 173