Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  150 bits (380), Expect = 5e-41
 Identities = 91/295 (30%), Positives = 165/295 (55%), Gaps = 14/295 (4%)

Query: 6   NQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSV 65
           N+F   +  +V ++ + +S+L     Q  E+A+ +   +++Q+H+ + +A A  E++ + 
Sbjct: 271 NRFVDKIHGLVRQITDMTSQLTGLVTQVSEQAQRSEQAMERQRHETDQVATAINEMSSAA 330

Query: 66  ATVAQTVN-------ETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLL 118
             VA++         +T E+  +A R+    + +I +  +DI +    +  + Q+++   
Sbjct: 331 QEVARSAQGAAVAAQQTDEEGQSAKRVVAGSIQQIHALVNDIRSSGVSLDSLQQDVAS-- 388

Query: 119 IEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTE 178
                I +VL VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T QST+
Sbjct: 389 -----IVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRALASRTQQSTQ 443

Query: 179 QIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQ 238
           +I+  I  L   T+   E + R +   + T+E+ + + +S+  +   +  I+  + QI  
Sbjct: 444 EIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGASLDTMAQLIGTINSMNAQIAS 503

Query: 239 SAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
           +A EQ    EEI+ ++ + + A +SV D     A+ ++ ++ +   + + + +FR
Sbjct: 504 AAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRSLADLGQRLGKLVGQFR 558