Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  142 bits (357), Expect = 3e-38
 Identities = 93/289 (32%), Positives = 155/289 (53%), Gaps = 2/289 (0%)

Query: 6   NQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSV 65
           N     +  ++ +V    +E+  QA Q    +  +   +  Q+ Q+E +A A  +++ + 
Sbjct: 388 NGTVAKIHDLIEQVGRTVAEVERQAGQVETVSARSNQAVAGQRTQIELVATAMNQMSATA 447

Query: 66  ATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKIT 125
             VA++       A +    T +    + S    I  + +E+ +  Q +++L  + + I+
Sbjct: 448 QEVARSAAAAVSSAHSVNDETLSGRGLVESQQGSIVRLASEIDQSVQVINQLATDSQAIS 507

Query: 126 TVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANIT 185
            VL+VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T QSTE+I+A IT
Sbjct: 508 RVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAKRTQQSTEEIEAMIT 567

Query: 186 NLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRT 245
            L+       + +     +   T  +    Q ++ N+  +V MI +++ QI  +A EQ+T
Sbjct: 568 RLHSGVGAAVKAMGTSHEMANGTVSQSEKVQQALENILGAVGMIVDQNQQI-AAAVEQQT 626

Query: 246 AI-EEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
           A+  +I   IV+ + A     + A Q  + ++ +SA    + + +  FR
Sbjct: 627 AVAHDIDQNIVQINRAGERTAEGAHQTEDASRELSAQVVQLKQLINAFR 675