Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  149 bits (375), Expect = 2e-40
 Identities = 92/296 (31%), Positives = 157/296 (53%), Gaps = 6/296 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + QGI +  TTLR ++  + +  +++   A++     E+  A ++ QK + + +A A  E
Sbjct: 347 LQQGIQRMGTTLRDLIGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKTETDQVATAMQE 406

Query: 61  LN---HSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKL 117
           ++   H VA  A+     A +A    R+ D VV +   A   I  + +E+ R    M +L
Sbjct: 407 MSATVHEVARNAEQACTVASEADAQARIGDQVVAQ---AIVQIERLASEVGRSVDAMDEL 463

Query: 118 LIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQST 177
             E  +I  +++VI  ++EQTNLLALNAAIEAARAG+ GRGFAVVADEVR LA +T  ST
Sbjct: 464 EQESARIGKIMDVIRAVAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRGLAQRTQHST 523

Query: 178 EQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIH 237
           E+I++ +  L   T  V   +     L + + E    +  S+ N+  +V  I   + QI 
Sbjct: 524 EEIESLVAGLQNGTRQVSSIMRNSRELTDSSVELAGKAGISLGNITQAVSGIQAMNQQIA 583

Query: 238 QSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
            +A +Q +  EEIS +I+   + +      + + A  +  ++ +   + + ++ F+
Sbjct: 584 AAAVQQSSVAEEISRSILNVRDVSEQTASASEETAASSIELARLGNQLQQLVSHFK 639