Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N2E2

 Score =  142 bits (357), Expect = 2e-38
 Identities = 89/261 (34%), Positives = 139/261 (53%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATVAQT 71
           L+T +  + + +  L  QA+QS   A  + + +++Q+ + E +A A  ++  +   VA  
Sbjct: 239 LKTCLTRLQDTAEHLNDQARQSNTLAHNSSSGLERQRVETEQVATAVNQMAATTQEVASH 298

Query: 72  VNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVI 131
           V  TA+    A RLT       G     I  +   +    Q +++L  + ++I  V++VI
Sbjct: 299 VQRTADATQEANRLTSRGRDIAGETREAIERLSVVVGETGQTVTQLAKDSDEIGGVVDVI 358

Query: 132 NDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRAT 191
             I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TS+ST QI A I  L +  
Sbjct: 359 KGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQTA 418

Query: 192 NTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEIS 251
               + +       E+   +V  +  ++  +  +V  I++ + QI  +  EQ +  EEIS
Sbjct: 419 TNAVQTMDAGHRQAEEGVARVMEADEALVGISEAVAHITDMTTQIAAATEEQSSVAEEIS 478

Query: 252 LAIVEASEAANSVYDRAAQNA 272
             I   SE A+    +A  +A
Sbjct: 479 RNISNISELADQTSGQAHSSA 499