Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 500 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  152 bits (384), Expect = 2e-41
 Identities = 97/287 (33%), Positives = 155/287 (54%), Gaps = 7/287 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + + IN     LR ++ ++ ++S  L   A Q      +  A ID QK + + +A A TE
Sbjct: 207 LLRSINNMAQRLRDVISQIGDSSHRLAASASQLATITTQTQAGIDSQKSETDLVATAMTE 266

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           +  +V  VA+   + A  A  A     N +     A + I  +  E+    + M+ L  E
Sbjct: 267 MTTTVQEVARNSEDAAGAAKKADHEASNALEVSQQAVAQIETLAREVGMSAESMTCLHQE 326

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
            E+I  VL+VI  ++ QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T QS+E+I
Sbjct: 327 SERIGGVLDVIKTVAGQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSSEEI 386

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           ++ I  L R    + EE +RM   ++ + ++   + + +RN   ++  I+++   I Q +
Sbjct: 387 ESLIEGLQR----IAEESSRM---MQASVQQTQSTVTGVRNTGDALAAITQQVSDIQQMS 439

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAE 287
               TA EE +    E + +  +V + A Q+A  +  +S  S  +A+
Sbjct: 440 MLIATAAEEQTAVAEEINRSVLNVRETADQSATASAEISVSSVELAQ 486



 Score = 25.4 bits (54), Expect = 0.003
 Identities = 18/121 (14%), Positives = 49/121 (40%), Gaps = 3/121 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + Q   Q +  + +++  +   + E     Q S ++ +  V  +      L  I    ++
Sbjct: 375 LAQRTQQSSEEIESLIEGLQRIAEESSRMMQASVQQTQSTVTGVRNTGDALAAITQQVSD 434

Query: 61  LNHS---VATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKL 117
           +      +AT A+     AE+   +         +  +A+++IS    E+ ++  ++ +L
Sbjct: 435 IQQMSMLIATAAEEQTAVAEEINRSVLNVRETADQSATASAEISVSSVELAQLGGDLQRL 494

Query: 118 L 118
           +
Sbjct: 495 V 495