Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 521 a.a., Aerotaxis receptor Aer from Pseudomonas fluorescens FW300-N1B4

 Score =  139 bits (351), Expect = 1e-37
 Identities = 88/261 (33%), Positives = 139/261 (53%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATVAQT 71
           L+T +  + + +  L  QA+QS   A  +   +++Q+ + E +A A  ++  +   VA  
Sbjct: 239 LKTCLTRLQDTAEHLTEQAKQSDTLAHNSSTGLERQRVETEQVATAVNQMAATTQEVASH 298

Query: 72  VNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVI 131
           V  TA+    A RLT       G     I  +   +      +++L  + ++I  V++VI
Sbjct: 299 VQRTADATQEANRLTGRGRDIAGETREAIQRLSVVVGETGLTVTQLAKDSDEIGGVVDVI 358

Query: 132 NDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRAT 191
             I++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA +TS+ST QI A I  L +  
Sbjct: 359 KGIADQTNLLALNAAIEAARAGEMGRGFAVVADEVRQLAQRTSESTGQIHALIAKLQQTA 418

Query: 192 NTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEIS 251
           +T  + +       E+   +V  +  ++  +  +V  I++ + QI  +  EQ    EEIS
Sbjct: 419 STAVQTMETGHRQAEEGVARVLEADQALVGISEAVANITDMTTQIAAATEEQSAVAEEIS 478

Query: 252 LAIVEASEAANSVYDRAAQNA 272
             I   S+ A+   ++A  +A
Sbjct: 479 RNISNISQLADQTSEQAQHSA 499