Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  159 bits (402), Expect = 2e-43
 Identities = 97/296 (32%), Positives = 160/296 (54%), Gaps = 6/296 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + +GI Q  +TLR ++  + +  S++   A++     ++  A ++ QK + + +A A  E
Sbjct: 347 LQRGIQQMGSTLRELIGGIRDGVSQISAAAEELSAVTQQTSAGVNSQKEETDQVATAMHE 406

Query: 61  LNHSVATVAQTVNETAEQALNA---TRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKL 117
           ++ +V  VA+   + A  A  A    R  D VV E+    + I  M + +VR  + M+ L
Sbjct: 407 MSATVQEVARNAEQAALAATEADSEAREGDRVVTEV---VTQIERMASAVVRSTEAMTAL 463

Query: 118 LIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQST 177
             E +KI +V+NVI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T +ST
Sbjct: 464 QEESDKIGSVMNVIRAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQKST 523

Query: 178 EQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIH 237
           E+I+  +  L   T  V   +     L +   E    + +S+ ++  +V  I   + QI 
Sbjct: 524 EEIEGLVAALQNGTQQVASIMHTSRDLTDSGVELARRAGASLGSITRTVSNIQAMNQQIA 583

Query: 238 QSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
            +A EQ    EEIS ++V   + +      + + A  +  ++ +   +   +++FR
Sbjct: 584 AAAEEQSAVAEEISRSVVNVRDVSEQTAAASEETAASSTELARLGGQLQMMVSRFR 639