Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 540 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  136 bits (343), Expect = 9e-37
 Identities = 94/292 (32%), Positives = 153/292 (52%), Gaps = 10/292 (3%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           M +  N F   L++ + ++ +A++ L   +++  +  + +      Q+H  ++I      
Sbjct: 247 MIELFNSFLDKLQSTIRQIIDAATPLGQVSKELYKLTQGSEENAKSQQHHTDSITRDILT 306

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           +  S+  VAQ   + +++A +A R        +GS ++ IS++ + ++   + M +L  E
Sbjct: 307 MTGSIQEVAQRSQQASDEANSAARQAATAREHVGSLSTGISDLGDSVMGAVKAMEQLEEE 366

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
            +++ +VL VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA KT+ ST +I
Sbjct: 367 TQEVGSVLTVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTAASTAEI 426

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSS---IRNVKSSVEMISERSDQIH 237
           +  I  L  + NTV   L  MT   EK+   +  S  +   +  +  +V  I E +  I 
Sbjct: 427 QQIIQRLQNSANTV---LNVMTSNGEKSRASIQRSIEATQLLETIARTVNQIDELNAGIA 483

Query: 238 QSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHM 289
           Q   EQ      +S +I + ++         A  AE T R+        +H+
Sbjct: 484 QFTQEQ----IGLSSSIQQETQVLQQDAQATANGAEATARLGEQLVSTGDHL 531