Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  151 bits (382), Expect = 3e-41
 Identities = 100/290 (34%), Positives = 151/290 (52%), Gaps = 15/290 (5%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           +   ++  T +LR ++  +    S++   A Q      +  A +  Q+ + E +A A   
Sbjct: 357 LQNAMHGMTQSLRNLIGRIGGGVSQIAAAADQLSAVTAQTSAGVQTQRVETEQVATAM-- 414

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHE----IGSATSDISNMCNEMVRVNQEMSK 116
             H +A   Q V   AEQA  A R  D    +    +  A   I N+ +E+ +    +  
Sbjct: 415 --HEMAATVQEVARNAEQASIAARQADQQARQGDRVVQDAVGQIGNLASEVDQSAHAIEA 472

Query: 117 LLIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQS 176
           L  E  +I +VL VI  ++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T  S
Sbjct: 473 LHAESGRIGSVLEVIRAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALARRTHDS 532

Query: 177 TEQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQI 236
           TE+I+  I NL R      E++     L ++T +  + +  ++  +  SV  I + + QI
Sbjct: 533 TEEIEGLIANLQRVAQQAVEQMQSSRSLTQRTVDLANEAGVALGRITESVSTIEQMNQQI 592

Query: 237 HQSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIA 286
             +AAEQ++A+ E        SE+   V D   Q+A  T++ +  SA +A
Sbjct: 593 -AAAAEQQSAVAE------NISESVTRVRDIGDQSASATEQTAGASAELA 635