Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  157 bits (398), Expect = 5e-43
 Identities = 92/293 (31%), Positives = 160/293 (54%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + QGI +  TTLR ++  + +  +++   A++     E+  A ++ QK + + +A A  E
Sbjct: 347 LQQGIQRMGTTLRELISGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHE 406

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           ++ +V  VA+   + +  A +A +   +    +G A   I  +  E+VR +  M+ L  +
Sbjct: 407 MSATVHEVARNAEQASVAASDADQQARDGDKVVGEAIQQIERLAAEVVRSSDAMNVLEQD 466

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
            +KI  V++VI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T QSTE+I
Sbjct: 467 SDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTEEI 526

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           +  +  L   T  V   +     L + + E    + +S+ ++  +V  I   + QI  +A
Sbjct: 527 EGLVAALQNGTRQVSGIMLGSRTLTDSSVELTRRAGTSLESITRTVSSIQAMNQQIAAAA 586

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
            +Q +  +EIS +IV   + +    + + + A  +  ++ +   +   ++ FR
Sbjct: 587 EQQSSVADEISRSIVNVRDVSEQTAEASEETAASSVELARLGGQLQMMVSHFR 639



 Score = 24.6 bits (52), Expect = 0.006
 Identities = 40/180 (22%), Positives = 70/180 (38%), Gaps = 25/180 (13%)

Query: 90  VHEIGSATSDISNMCNEMVRVNQEMSKLLIE----GEKITTVLNVINDISEQTNLLALNA 145
           + E+   T D     N M  V Q  +K+  E    G      +  +N+   Q +  A  A
Sbjct: 106 LRELADVTRDYEASLNSMRAVYQAGAKVRNEMTANGTAAMQAVESLNNAVLQIDP-ADPA 164

Query: 146 AIEAARAGEQGR-GFAVVADEVRNLAVKTSQSTE-----QIKANITNLNRATNTVEEELT 199
             + A+     R    +V  EVR      +  TE     Q+ + I++L+R          
Sbjct: 165 RFDLAQLANSARQDLVLVRYEVRGYTGNPNDKTETAAFQQLDSAISHLDRFK-------- 216

Query: 200 RMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEISLAIVEASE 259
                     E+++  +S++RN +SSV++    +    Q+AA  R  +      IV+  E
Sbjct: 217 --AAFGPANREQIAQFESALRNYRSSVDVFKATT----QTAASVRKDLTTQGATIVKLGE 270