Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  145 bits (367), Expect = 2e-39
 Identities = 89/283 (31%), Positives = 154/283 (54%), Gaps = 7/283 (2%)

Query: 5   INQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHS 64
           +N  +  LRT + E++ AS++L   A +     E     + QQ  ++E  A A  E++ +
Sbjct: 252 LNTMSGNLRTTIHEISGASAQLSTAAVEMTSITESADRTLQQQNSEIEQAATAVNEMSAA 311

Query: 65  VATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKI 124
           V  VA+    T++ A  ++   D     +    + + N+   +   + +++ L  + + I
Sbjct: 312 VEEVARNATSTSQAAQQSSLSADLGNQRVNETLTAMQNLTGLVEGSSAQVTALAGQAQDI 371

Query: 125 TTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANI 184
           + VL VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T  ST++++  I
Sbjct: 372 SKVLGVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAHRTQTSTQEVEQMI 431

Query: 185 TNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQR 244
           + +   ++   E + + T  +  T +    +  S+R +  SV  I+ R+ QI  ++ +Q 
Sbjct: 432 SAIQAGSSATVESMHKSTQEVHVTRKTAEDAGESLRQITDSVLEINNRNLQIAAASEQQA 491

Query: 245 TAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAE 287
               ++  ++V       S+ D A Q++EGT++    S  +++
Sbjct: 492 HVARDVDRSLV-------SIRDLAVQSSEGTRQTLIASTELSQ 527