Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  168 bits (426), Expect = 3e-46
 Identities = 94/289 (32%), Positives = 164/289 (56%)

Query: 5   INQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHS 64
           +   T +LRT++  ++N  +++   A++    +E+  A + QQK +++ +A A  ++  +
Sbjct: 353 MQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKLEVDQVATAMNQMAST 412

Query: 65  VATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKI 124
           V  VAQ   + ++ A  A+    +    +  AT +IS +  E+ ++ + M +L+ + +KI
Sbjct: 413 VQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQLGEAMQRLIQDSDKI 472

Query: 125 TTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANI 184
             V++VI  ++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T  ST +I+A I
Sbjct: 473 GGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQSSTTEIEALI 532

Query: 185 TNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQR 244
            +L   T    E +       E T      ++ S+  +  S+  I + S QI  +A EQ 
Sbjct: 533 KSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTIEQMSQQISAAAEEQS 592

Query: 245 TAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
              +EI+ +++   + A+       Q+A  T  ++ + + + + +A+FR
Sbjct: 593 AVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMVARFR 641