Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 653 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  145 bits (365), Expect = 3e-39
 Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 4/287 (1%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           +++ ++     +  ++ E+ +A++++   A+QS   A +    + QQ+   + +A A +E
Sbjct: 359 ISRNLDNMAHQISEVISEIGSATAQVATAAEQSSAVALQTNQNVAQQRQGTDQVATAISE 418

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           ++ +V  VA++  + AE +      T     EI +    I  +  +    ++ + +L  E
Sbjct: 419 MSATVKDVARSTTDAAEMSQRVNSSTVQGKTEIDNTIGLIQELSVQAEETSRIIDELKGE 478

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
              I++VL+VI  +++QTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA KT  ST  I
Sbjct: 479 SNSISSVLDVIRGVADQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKKTQDSTVSI 538

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           +  I NL   +      +    G  ++ A  V  +   +  +   +  IS+R+ Q+  +A
Sbjct: 539 QKMIANLQSGSERAAASMQETLGKAQEGASNVVRAGELLEEIAEGIATISDRNIQVASAA 598

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAE 287
            EQ    EEI   +    +  NS+  + +  AE T   S   A +AE
Sbjct: 599 EEQSLVAEEIHRNV----DDINSLVIQVSAGAEQTAVTSRELARLAE 641