Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  156 bits (395), Expect = 1e-42
 Identities = 89/289 (30%), Positives = 158/289 (54%)

Query: 5   INQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHS 64
           +   T +LR ++  + N  +++   A+Q    +E+  A +  QK++++ +A A  E+  +
Sbjct: 392 MQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMAST 451

Query: 65  VATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKI 124
           V  VA+   + ++ A  A+    +    +  AT +I  +  E+ ++ + M +L  +  KI
Sbjct: 452 VQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSGKI 511

Query: 125 TTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANI 184
            +V++VI  ++EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T  ST +I+A I
Sbjct: 512 GSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEALI 571

Query: 185 TNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQR 244
             L + T      +       E T      ++ ++  +  S+  I + S QI  +A +Q 
Sbjct: 572 QALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQQS 631

Query: 245 TAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
              EEI+ +++   + A+       Q+A  T  ++ + + +   +A+F+
Sbjct: 632 AVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFK 680