Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  147 bits (372), Expect = 4e-40
 Identities = 95/287 (33%), Positives = 159/287 (55%), Gaps = 22/287 (7%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAE-------ENVAQIDQQKHQLETIAAAATELNHS 64
           LRT +  ++   +++R+ AQ+  + +         N AQI  Q  + E +A A +E+   
Sbjct: 256 LRTALSRLSETITDVRMAAQEVSQSSSVLSAASSANNAQIMVQTREAEQVATAISEM--- 312

Query: 65  VATVAQTVNETAEQALNATRLTDNVVHE----IGSATSDISNMCNEMVRVNQEMSKLLIE 120
            ATV++ V+  A QA +A RL D+ V      +   T+ I  +   +      + ++   
Sbjct: 313 AATVSE-VSGYASQAADAARLADSEVASGNSLVEGTTTAIEQLAATLTETTSTVEQVSRH 371

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
           GE+I  V+ VIN I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T  ST++I
Sbjct: 372 GEEIEKVIEVINSIASQTNLLALNAAIEAARAGEHGRGFAVVADEVRSLANRTQLSTQEI 431

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           +  I+ L   T T  + +     L+ +  E+  ++QS++  +   V  I+  + QI  ++
Sbjct: 432 QNMISTLQGGTETAAQNMRDSCELVNRAVEQTRNAQSALSRINQEVSAINHMNAQIASAS 491

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAE 287
            +Q    E++++ I        S++D   ++A G+++V+  S  +A+
Sbjct: 492 VQQSAVAEDVAMNI-------TSIHDSTLKSANGSQQVATASEELAQ 531