Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  161 bits (407), Expect = 4e-44
 Identities = 96/293 (32%), Positives = 159/293 (54%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + QGI +  TTLR ++  + ++  ++   A++     E+  A ++ QK + + +A A  E
Sbjct: 347 LQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHE 406

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           ++ +VA VA+   + ++ A NA R   +    +G A + I  + NE+ R    M++L  E
Sbjct: 407 MSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRSVDAMTELEQE 466

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
            +KI  V++VI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR LA +T QST +I
Sbjct: 467 SDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLAQRTQQSTVEI 526

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           +  +  L   T  V   +     L   +      + +S+ ++  +V  I   + QI  +A
Sbjct: 527 ETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQAMNQQIAAAA 586

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
            EQ    EEIS +IV   + +      + + A  +  ++ +   +   +++FR
Sbjct: 587 EEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVSRFR 639