Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  153 bits (386), Expect = 1e-41
 Identities = 95/285 (33%), Positives = 152/285 (53%), Gaps = 4/285 (1%)

Query: 5   INQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHS 64
           I + T +LR +V  + +  +++   A++     E+  A ++ QK + + +A A  E+  +
Sbjct: 349 IQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVETDQVATAMHEMTAT 408

Query: 65  VATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKI 124
           V  VA+   E +E A+ A R   +    +  A + I  + + +   ++ M  L  E +KI
Sbjct: 409 VQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSSEAMGALKQESDKI 468

Query: 125 TTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANI 184
            +VL+VI  ++EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T +STE+I+A I
Sbjct: 469 GSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQRTQKSTEEIEALI 528

Query: 185 TNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQR 244
             L   T      +     L   + E    +  S+ N+  +V  I   + QI  +A EQ 
Sbjct: 529 ARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQAMNQQIAAAAEEQS 588

Query: 245 TAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHM 289
              EEI+ +I+   +    V ++ +  +E T   S   A +  H+
Sbjct: 589 ATAEEINRSIINVRD----VSEQTSAASEETAASSVELARLGNHL 629