Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  156 bits (395), Expect = 9e-43
 Identities = 94/288 (32%), Positives = 160/288 (55%)

Query: 6   NQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSV 65
           NQF   L+ I+ +V + +  ++  A     +  E   Q++   ++ + +  A TE++ + 
Sbjct: 270 NQFVDKLQGIIRDVADTTGRVKQAAVDIDRQTSEMANQLNSHNNETDQVVTAITEMSSTA 329

Query: 66  ATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKIT 125
           A VAQ   + AE    AT         + ++ ++ISN+ +++      +  L  + +KI 
Sbjct: 330 AEVAQNTTQVAEATQAATGDVAKAQACVDTSLAEISNLMSQVNDAAANIQSLSEQSQKIN 389

Query: 126 TVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANIT 185
           +VL+VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA +T  ST +I   +T
Sbjct: 390 SVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTLEINEMLT 449

Query: 186 NLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRT 245
           +L+R  ++  + +       +++ E  +    S+ +V S+V  I++ S QI  +A EQ +
Sbjct: 450 DLHRLVSSAVKTMDESQHSCQRSVEASTAISESLGSVTSAVTAINDMSTQIAAAATEQSS 509

Query: 246 AIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
             EEI+  +    E  N++   + +    ++ VS   A ++  + +F+
Sbjct: 510 VTEEINRNVYAIQEIVNALLVSSQEARTVSRTVSTEGAQLSNLVGQFK 557