Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  154 bits (390), Expect = 4e-42
 Identities = 94/291 (32%), Positives = 152/291 (52%)

Query: 4   GINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNH 63
           G N F   L  ++ E+   ++E R ++Q +   AEE    +++Q  ++E++  A  E++H
Sbjct: 416 GFNAFIGKLHGLISELKKVATESRNESQATARIAEETKQSVNRQYSEIESVVTAVNEMSH 475

Query: 64  SVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEK 123
           +   VA+   +TA ++             +  A S +S M  E ++    + K+      
Sbjct: 476 TAHEVAKASEQTASESAAMASQVKVSQDSLTQAVSLVSTMSKESLQAKIAVGKVAESSTN 535

Query: 124 ITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKAN 183
           I+ +L VI+ I+ QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA KT  ST+ I   
Sbjct: 536 ISKILEVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASKTQASTDDISRL 595

Query: 184 ITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQ 243
           I  L +        + +  GL E+   +   +  ++  + + +  IS +  QI  +A EQ
Sbjct: 596 IDALEQEVKGASGIIDKGVGLAEQAVAQTEQAFEALSVMVAGINEISNQVTQIATAAEEQ 655

Query: 244 RTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFRT 294
               EE+S  I   S++A  + D A +  E ++ ++ +       +AK RT
Sbjct: 656 SAVTEEVSRNITGISDSAAELMDLAGKARESSESLAKLVGRQESQLAKLRT 706