Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  141 bits (355), Expect = 5e-38
 Identities = 85/293 (29%), Positives = 155/293 (52%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           M    N+F   ++ ++ +  + + ++     ++R+  +  V  + +QK Q++++AAAA E
Sbjct: 372 MADAFNRFAAKVQQMLRQTRDLTRDVDDGIVEARKICDVAVGAVSRQKAQIDSVAAAAIE 431

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           + H+   +A +   TA+ A  A    D+    +  ATS I  + + ++     + +L   
Sbjct: 432 MAHTSQEMAASAQRTADFAETAQTQADDGKQIVAEATSGIETLSSRVIEAAAVIKELRGS 491

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
            EKI  VL+VI +I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T  ST  I
Sbjct: 492 SEKIGEVLSVIRNIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANI 551

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           +  I  L ++    E  +       ++     S  Q S+  +  ++  I +++ +I  + 
Sbjct: 552 QGIIQRLQQSAMEAESVMEAGVNDAKRGQLLTSQVQDSLGKITDAIGAILQQTTEITVAI 611

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
            +Q    +E++  +      ++  +  + + A   K    ++  ++ ++++FR
Sbjct: 612 GQQAVVADEVAQNVENVRGLSDDSHSASQELAVSLKAFEQLTHALSGNISQFR 664