Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 517 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  139 bits (350), Expect = 1e-37
 Identities = 83/244 (34%), Positives = 134/244 (54%), Gaps = 4/244 (1%)

Query: 23  SSELRLQAQQSREK----AEENVAQIDQQKHQLETIAAAATELNHSVATVAQTVNETAEQ 78
           S +  LQ Q+  E     + +  A +D Q  QLE +A A  E+  ++  VA    +T+E+
Sbjct: 242 SQDQALQLQRIAENLVVASGQTEASLDMQHRQLEQLACAMEEMTATIGEVALNSRQTSEK 301

Query: 79  ALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVINDISEQT 138
             +A +L  +  H +      I+N+ + +        KL  E EK+ + ++ I+ I+EQT
Sbjct: 302 IRDAQQLCQHNAHAMSEKRVRIANLADAVAEAASNAEKLNREAEKVASAMSEIDAIAEQT 361

Query: 139 NLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRATNTVEEEL 198
           NLLALNAAIEAARAGEQGRGFAVVADEVR L+ +T QST  I  ++  +     +  EE+
Sbjct: 362 NLLALNAAIEAARAGEQGRGFAVVADEVRALSSRTQQSTMSISRSVEQMFSMLGSWAEEM 421

Query: 199 TRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEISLAIVEAS 258
            R     E  A  ++ S   I+N+   +  I + ++Q   ++A+Q T + +++  + + +
Sbjct: 422 GRSQQEAEACARAIAESVDDIQNIHVQISEIHDFAEQNAVASAQQETVVADMNQNLQQIA 481

Query: 259 EAAN 262
             AN
Sbjct: 482 HGAN 485