Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 478 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  146 bits (368), Expect = 1e-39
 Identities = 88/282 (31%), Positives = 154/282 (54%), Gaps = 1/282 (0%)

Query: 14  TIVVEVNNASSELRLQAQQSREKA-EENVAQIDQQKHQLETIAAAATELNHSVATVAQTV 72
           T +V+V  A+++      +S E+  ++++ QI++Q   L+++A A  E+  S   V+   
Sbjct: 196 TELVKVVKANADTLSDTSESFEREMKQSLQQINRQYVSLDSVATAMEEMTASAQEVSNIS 255

Query: 73  NETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVIN 132
            +  E+        ++    +  A SDI  +   + + +  ++ L +   +I  V+  IN
Sbjct: 256 RQATEKTEQDATQVESSFQRVQKAISDIEQLSGLIEQASSSVATLNVNTTQINEVITTIN 315

Query: 133 DISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRATN 192
            ISEQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +T  +T +I+A I  L   + 
Sbjct: 316 AISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQAATVEIQAMIEKLQGESR 375

Query: 193 TVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEISL 252
            +     +     + ++  +++  + +R +  S   I++ S QI  SA EQ +    I+ 
Sbjct: 376 NIANITEKTVSQAQSSSGVIANIGADVRGIADSSRAITDMSIQISTSAEEQSSVANSIAA 435

Query: 253 AIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFRT 294
            + +    +N++   A Q++EG  R++  S  + + +A++RT
Sbjct: 436 ELSDIRNQSNTIRTVAEQSSEGVARLAEASRSLGKVLARYRT 477



 Score = 33.1 bits (74), Expect = 1e-05
 Identities = 31/173 (17%), Positives = 71/173 (41%), Gaps = 7/173 (4%)

Query: 2   TQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATEL 61
           T  IN+  TT+  I  + N  +    ++A ++ E+        D+ +       AA  E+
Sbjct: 304 TTQINEVITTINAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQAATVEI 363

Query: 62  NHSVATV---AQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLL 118
              +  +   ++ +    E+ ++  + +  V+  IG+    I++    +  ++ ++S   
Sbjct: 364 QAMIEKLQGESRNIANITEKTVSQAQSSSGVIANIGADVRGIADSSRAITDMSIQISTSA 423

Query: 119 IEGEKI-TTVLNVINDISEQTNLL---ALNAAIEAARAGEQGRGFAVVADEVR 167
            E   +  ++   ++DI  Q+N +   A  ++   AR  E  R    V    R
Sbjct: 424 EEQSSVANSIAAELSDIRNQSNTIRTVAEQSSEGVARLAEASRSLGKVLARYR 476