Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  136 bits (343), Expect = 9e-37
 Identities = 93/288 (32%), Positives = 156/288 (54%), Gaps = 12/288 (4%)

Query: 6   NQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSV 65
           N+F   L   +  V N +S L   A   ++K E       +Q H  +T+ A+  E+  SV
Sbjct: 251 NRFLGLLAGSIQRVVNVTSPLLNNAHDLKDKMETATGATQRQSHDAQTVQASMEEMRLSV 310

Query: 66  ATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCN-EMVRVNQEMSKLLIEGEKI 124
             ++   ++ A+ A  A R   + +  +   T DIS   N E+      +++L  + E +
Sbjct: 311 IDISHNASQAADAAQIAEREAMDGMAVV-QRTMDISLELNREIEHAANAINELAKDTESV 369

Query: 125 TTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANI 184
           +++LNVI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA KT+ +T++I+  +
Sbjct: 370 SSILNVITSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTADATKEIREVL 429

Query: 185 TNLNRATNTVEEELTRMTGLLEKTAEKVSHSQS---SIRNVKSSVEMISERSDQIHQSAA 241
           T L  A    E  ++ MT  + K++E   H+Q    +++ ++  +  I+  +  I +S  
Sbjct: 430 TRLKGA---AESSVSTMTVAMSKSSENEEHAQKTGLALKTIQEQIVSINAMNTHIARSTD 486

Query: 242 EQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHM 289
           EQ     +++  +V+     N+ +++     +   +VS+  +  AE +
Sbjct: 487 EQ----SQVASRVVDNVVDMNASFEQTLSILDQVHQVSSELSEFAEEL 530