Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25-INTG

 Score =  145 bits (365), Expect = 3e-39
 Identities = 86/291 (29%), Positives = 153/291 (52%), Gaps = 4/291 (1%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           +  G N F   L+ ++ +V ++  ++   ++ + + A      + +Q  +++ +A A  E
Sbjct: 419 IANGFNTFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHE 478

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIE 120
           +  +   VA+   + A+ A +A +     +  +   ++ I  +  E+ +    +  L  +
Sbjct: 479 MTATAQDVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVGVVQTLAKD 538

Query: 121 GEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI 180
            E I  +L  I  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA KT ++TE+I
Sbjct: 539 SENINAILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEI 598

Query: 181 KANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSA 240
           +A I  L + T  V   +       +++ +  + +  ++  +  +V +I++ + QI  +A
Sbjct: 599 QAMIQQLQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETISQAVSVINDMNTQIASAA 658

Query: 241 AEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAK 291
            EQ    E+I+  ++   + AN V    A  A+ +   SA    +AE   +
Sbjct: 659 EEQSAVAEDINRNVINIGQVANEV----AGGADESSAASADLTKLAEQQRR 705