Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  150 bits (379), Expect = 8e-41
 Identities = 88/289 (30%), Positives = 149/289 (51%)

Query: 5   INQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHS 64
           +N F   L+ +++E+++AS ++     Q    +E N   + +   + E +  A +++N S
Sbjct: 398 VNSFIGYLQAMMLEISHASQKITQGIGQLDSHSENNRQALSKHSSETELVVTAISQMNAS 457

Query: 65  VATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKI 124
              VAQ+  + A     A          +  A   +  + NEM   +Q +  +     +I
Sbjct: 458 ADAVAQSAGKMAASTHQANEEAKTSTLTVSDAAGSVQALANEMNSASQSIHTMSENTNQI 517

Query: 125 TTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANI 184
            +VL VI +I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T   T QI+  +
Sbjct: 518 ISVLGVIKEIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSCTTQIEQIL 577

Query: 185 TNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQR 244
           T L R  +T E+ +       ++  +  +   S++  V  S+  +++   QI  ++ +Q 
Sbjct: 578 TTLRRDADTAEQLMLETQNSCQQVTQNTARVTSNLGAVTDSIAELNDLGGQIASASEQQS 637

Query: 245 TAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
               EIS  +      A ++     Q  E T+ +SA +  ++  + KF+
Sbjct: 638 VVTAEISQNMHTIEAMAQTLLQNGQQTLESTQSLSAANQQLSAMVRKFK 686