Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 705 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  149 bits (376), Expect = 2e-40
 Identities = 93/295 (31%), Positives = 157/295 (53%), Gaps = 8/295 (2%)

Query: 4   GINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNH 63
           GIN F   LR ++ E+   +S  + ++Q + E A++    +++Q   +E++  A  E++ 
Sbjct: 415 GINGFINKLRLLIGELKELASRSQAESQVAAEIAQQTHNSVNRQYSDIESVVTAVNEMSA 474

Query: 64  SVATVA----QTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLI 119
           +   VA    QT +ET    LN     D++   +G  T    +M  E +   + + K+  
Sbjct: 475 TALEVAKASEQTASETEAMTLNVKAGEDSLSQAMGYVT----HMSQESLLAKEAVGKVAE 530

Query: 120 EGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQ 179
               I+ +L VI+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR LA KT  ST++
Sbjct: 531 SSTNISKILEVISAIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTQSSTDE 590

Query: 180 IKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQS 239
           I   I  L R  N+  + + +     ++   +   + SS+  + + ++ +S +   I  +
Sbjct: 591 IGKLIEALQREVNSASQIIDQGVDGAQRAVAQTESALSSLNTIVNQIQEVSSQVTHIATA 650

Query: 240 AAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFRT 294
           A EQ    EE+S  I   S++A+ +   A +  + +  ++ +     + + K +T
Sbjct: 651 AEEQSAVTEEVSRNITGISDSASELARLADEAQQSSASLAGLVEQQHQQLGKLKT 705