Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 592 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  144 bits (364), Expect = 4e-39
 Identities = 90/268 (33%), Positives = 144/268 (53%), Gaps = 7/268 (2%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATVAQT 71
           L+ +V  V +AS +L  Q  QS + A         Q  ++   AAA  E+N +V  VA+ 
Sbjct: 314 LQGVVEVVGSASEQLSAQIGQSTQGAAV-------QSQRVAETAAAMEEMNATVLEVARN 366

Query: 72  VNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKITTVLNVI 131
            ++ A+ A  A    D     +G    +I  +  + V +  +M+ L  + + I  ++NVI
Sbjct: 367 ASQAADTAERARSKADTGAAVVGRVVEEIGTVERQAVALKDDMADLGRQADGIGKIMNVI 426

Query: 132 NDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKANITNLNRAT 191
           +DI++QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA KT Q+T ++   IT + + T
Sbjct: 427 SDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAEKTMQATREVGEAITGIQQGT 486

Query: 192 NTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAEQRTAIEEIS 251
               E + R    +E+       S  ++R + + VE  +++   I  ++ +Q  A EEI+
Sbjct: 487 RRNVEHVERAVASIEEATGLAGSSGEALREIVTLVEQATDQVRSIATASEQQSAASEEIN 546

Query: 252 LAIVEASEAANSVYDRAAQNAEGTKRVS 279
            A+ E +  +    D   Q+A   + ++
Sbjct: 547 RAVDEINRISGETTDGMHQSARAVEELA 574



 Score = 25.0 bits (53), Expect = 0.004
 Identities = 23/117 (19%), Positives = 50/117 (42%), Gaps = 17/117 (14%)

Query: 18  EVNNASSELRLQAQQSREKAEENVAQIDQQK----------HQLETIAAAATELNHSVAT 67
           EV  A + ++   +++ E  E  VA I++             ++ T+   AT+   S+AT
Sbjct: 474 EVGEAITGIQQGTRRNVEHVERAVASIEEATGLAGSSGEALREIVTLVEQATDQVRSIAT 533

Query: 68  VAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGEKI 124
                   +EQ   A+   +  V EI   + + ++  ++  R  +E++   +   K+
Sbjct: 534 -------ASEQQSAASEEINRAVDEINRISGETTDGMHQSARAVEELATQALSLRKL 583