Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 677 a.a., methyl-accepting chemotaxis protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  133 bits (334), Expect = 1e-35
 Identities = 91/277 (32%), Positives = 145/277 (52%), Gaps = 28/277 (10%)

Query: 3   QGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELN 62
           +G+    + L  IV  +++AS EL  Q +Q+   +   + +  +        A A  E+N
Sbjct: 392 EGLLLAASQLEGIVERISSASEELSAQVEQAARGSSTQLQRTTEA-------ATAMEEMN 444

Query: 63  HSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGE 122
            SV  +A+   E AE + +A R  D     +GS    IS++  +   +   +  L    E
Sbjct: 445 ASVMEIARNAAEAAESSEHARREADEGASVVGSVVEAISDVDAKTGELKLSLDMLGTRAE 504

Query: 123 KITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQI-- 180
            I  ++ VI DI++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA KT  +T+++  
Sbjct: 505 NIGQIMTVITDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMNATKEVGE 564

Query: 181 ---------KANITNLNRATNTV----------EEELTRMTGLLEKTAEKVSHSQSSIRN 221
                    K NI  ++ A  +V           + L R+ GL+E +A++V    ++   
Sbjct: 565 AVRAIQSGTKDNIRGMDEAAMSVGRSTELASIAGDALARIVGLIEGSADQVRAIATASEE 624

Query: 222 VKSSVEMISERSDQIHQSAAEQRTAIEEISLAIVEAS 258
             ++ E I+  +D++++ A+E   A+ E + A+ E S
Sbjct: 625 QSAASEQINRGTDEVNRIASETAGAMGECAKAMTELS 661



 Score = 27.3 bits (59), Expect = 0.001
 Identities = 21/126 (16%), Positives = 53/126 (42%), Gaps = 17/126 (13%)

Query: 12  LRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQ------QKHQLETIAAAA------- 58
           +R +  +  NA+ E+    +  +   ++N+  +D+      +  +L +IA  A       
Sbjct: 548 VRKLAEKTMNATKEVGEAVRAIQSGTKDNIRGMDEAAMSVGRSTELASIAGDALARIVGL 607

Query: 59  ----TELNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEM 114
                +   ++AT ++  +  +EQ    T   + +  E   A  + +    E+  + QE+
Sbjct: 608 IEGSADQVRAIATASEEQSAASEQINRGTDEVNRIASETAGAMGECAKAMTELSAMTQEL 667

Query: 115 SKLLIE 120
             L+++
Sbjct: 668 RSLIVK 673