Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  140 bits (353), Expect = 8e-38
 Identities = 91/284 (32%), Positives = 156/284 (54%), Gaps = 13/284 (4%)

Query: 3   QGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELN 62
           +GI Q    L +IV ++ +AS EL  Q  ++   +       D Q+ +    A A  E+N
Sbjct: 409 EGIMQTAGRLESIVDQITSASQELASQIGEATRGS-------DIQRARTTEAATAMEEMN 461

Query: 63  HSVATVAQTVNETAEQALNATRLTDN---VVHEIGSATSDISNMCNEMVRVNQEMSKLLI 119
            SV  VA   +  AE A +A +  +    +V ++ S+  +++    EM     ++ K   
Sbjct: 462 ASVLEVASNASRAAESAEHARKEAEGGGGIVRDVVSSIGEVNRFAAEMGGSLDDLGK--- 518

Query: 120 EGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQ 179
           + E I  ++ VI DI++QTNLLALNAAIEAARAGE GRGFAVVADEVR LA KT  +T++
Sbjct: 519 QAEGIGHIMTVITDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATKE 578

Query: 180 IKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQS 239
           +   I  + R T    + ++R +G++ ++ +  S +  ++  + + VE  +++   I  +
Sbjct: 579 VGDAIGAIQRGTRNNIDGMSRASGVISQSTDLASRAGDALGRIVNIVESTADQVRSIATA 638

Query: 240 AAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISA 283
           + EQ  A EEI+ +  E +  A+ + +  +Q+A     ++ ++A
Sbjct: 639 SEEQSAASEEINRSTEEVNRIASEMAEAMSQSAVAVNELARLAA 682



 Score = 38.5 bits (88), Expect = 4e-07
 Identities = 52/245 (21%), Positives = 111/245 (45%), Gaps = 32/245 (13%)

Query: 9   TTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELNHSVATV 68
           TT   T + E+N +  E+   A ++ E AE    + +     +  + ++  E+N   A +
Sbjct: 450 TTEAATAMEEMNASVLEVASNASRAAESAEHARKEAEGGGGIVRDVVSSIGEVNRFAAEM 509

Query: 69  AQTVNETAEQALNATRLTDNVVHEIGSATSDIS-NMCNEMVRVNQ----------EMSKL 117
             ++++  +QA     +   V+ +I   T+ ++ N   E  R  +          E+ KL
Sbjct: 510 GGSLDDLGKQAEGIGHIM-TVITDIADQTNLLALNAAIEAARAGEAGRGFAVVADEVRKL 568

Query: 118 LIE--------GEKITTVL----NVINDISEQTNLLALNAAIEAARAGEQ-GRGFAVV-- 162
             +        G+ I  +     N I+ +S  + +++ +  + A+RAG+  GR   +V  
Sbjct: 569 AEKTMTATKEVGDAIGAIQRGTRNNIDGMSRASGVISQSTDL-ASRAGDALGRIVNIVES 627

Query: 163 -ADEVRNLAVKT---SQSTEQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSS 218
            AD+VR++A  +   S ++E+I  +   +NR  + + E +++    + + A   +  Q  
Sbjct: 628 TADQVRSIATASEEQSAASEEINRSTEEVNRIASEMAEAMSQSAVAVNELARLAADLQDI 687

Query: 219 IRNVK 223
           IR +K
Sbjct: 688 IRQLK 692