Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  147 bits (372), Expect = 4e-40
 Identities = 90/291 (30%), Positives = 157/291 (53%)

Query: 3   QGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELN 62
           +  N F   L+TI+ +V +A+++++  A    ++ +    Q+    ++ + +  A TE++
Sbjct: 263 RSFNLFVDKLQTIIGDVAHATAKVKTAANAIHDQTKVMSRQLISHNNETDQVVTAITEMS 322

Query: 63  HSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGE 122
            + + VAQ   + AE    AT    N    + ++  +IS +  ++      +  L  + +
Sbjct: 323 ATASEVAQNTTQVAEATHAATGDVANAQRCVDASLEEISALMAQINNAASNIQSLSEQSQ 382

Query: 123 KITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKA 182
           KI +VL+VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA +T  ST +I  
Sbjct: 383 KINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQSSTLEINE 442

Query: 183 NITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAE 242
            ++ L++  +   + +        ++ +       S+ +V S+V  I++ S QI  +A E
Sbjct: 443 MLSELHKLVSLAVKTMEESQQSCIRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATE 502

Query: 243 QRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
           Q +  EEI+  +    E  N +   + + A  ++ VS     + + + +F+
Sbjct: 503 QSSVTEEINRNVFAIQEIVNELLHSSEEAASVSQTVSQEGLNLGKLVGQFK 553