Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  152 bits (383), Expect = 2e-41
 Identities = 91/291 (31%), Positives = 159/291 (54%)

Query: 3   QGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELN 62
           Q  N F   L+TI+ +V NA+++++  A    ++ +   +Q+    ++ + +  A TE++
Sbjct: 263 QAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLLSHNNETDQVVTAITEMS 322

Query: 63  HSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGE 122
            + + VAQ   + AE    AT    N    + ++  +I+ + +++      +  L  + +
Sbjct: 323 STASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMSQINNAAGSIKSLSEQSQ 382

Query: 123 KITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKA 182
           KI +VL+VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLA +T  ST +I  
Sbjct: 383 KINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLASRTQASTLEINE 442

Query: 183 NITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQIHQSAAE 242
            ++ L++  +   + +        ++ +       S+ +V S+V  I++ S QI  +A E
Sbjct: 443 MLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSAVTAINDMSTQIATAATE 502

Query: 243 QRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
           Q +  EEI+  +    E  N +   +   A+ ++ VS     + + + +F+
Sbjct: 503 QSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQTVSQEGINLGKLVGQFK 553