Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  140 bits (353), Expect = 8e-38
 Identities = 88/297 (29%), Positives = 154/297 (51%), Gaps = 8/297 (2%)

Query: 1   MTQGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATE 60
           + +  N+   +LR ++V + + S++L   A+Q+     +  + I +QK Q++ +A A TE
Sbjct: 380 LAKNCNRLVDSLRGLIVGILDRSNQLAAAAEQTSAITAQTTSGIQEQKSQVDQVATATTE 439

Query: 61  LNHSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSD----ISNMCNEMVRVNQEMSK 116
           L+ S    AQ V+ +A+ AL   +  D     + +   +    I  + +E+ +  Q ++K
Sbjct: 440 LSSS----AQQVSMSADDALAQIKQADQEAKHMRTIAEENKRTILALADEVAKAGQVINK 495

Query: 117 LLIEGEKITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQS 176
           +  +   I ++L+VI  I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +T  S
Sbjct: 496 VQSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQVS 555

Query: 177 TEQIKANITNLNRATNTVEEELTRMTGLLEKTAEKVSHSQSSIRNVKSSVEMISERSDQI 236
           T +I+  I  L +        +           +K   +  ++  +  SV    +    I
Sbjct: 556 TREIQQMIEVLQQGAQQAVAAMDMGRAQANACVDKTEQANLALETISQSVHKAYDAGTHI 615

Query: 237 HQSAAEQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFR 293
             +A EQ    +++S  +   +  +      A Q A+ + +V+ ++  +   + +FR
Sbjct: 616 AHAAQEQNVVSQQVSEKLEHIAAISEETAIGADQTAQSSHQVAKLAEELQASVGEFR 672