Pairwise Alignments

Query, 294 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  139 bits (351), Expect = 1e-37
 Identities = 91/299 (30%), Positives = 158/299 (52%), Gaps = 14/299 (4%)

Query: 3   QGINQFTTTLRTIVVEVNNASSELRLQAQQSREKAEENVAQIDQQKHQLETIAAAATELN 62
           +G N F   L+ ++ E+   +   + ++  S + AE     + +Q  ++E++  A  E++
Sbjct: 415 KGFNSFIHKLKDLISELKTLAGRTQEESLSSAQIAELTHDSVHRQYGEIESVVTAVNEMS 474

Query: 63  HSVATVAQTVNETAEQALNATRLTDNVVHEIGSATSDISNMCNEMVRVNQEMSKLLIEGE 122
            +   VA+   +TA +    +R        +  A   ++ M  E ++    +SK+     
Sbjct: 475 ATALEVAKASEQTAAETEAMSRNVRLSEESLTKAMEYVTTMSQESMQAKVAVSKVAESST 534

Query: 123 KITTVLNVINDISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAVKTSQSTEQIKA 182
            I+ +L VI+ I+ QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA KT  ST+ I  
Sbjct: 535 NISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRALASKTQSSTDDISV 594

Query: 183 NITNLNRATNTVEEELTRMTGLLEKTAEK----VSHSQSSIRNVKSSVEMISERSDQIHQ 238
            I       + +++E+   +G+++K AE+    VS ++ ++ ++ S V  I E S Q+  
Sbjct: 595 LI-------DALQQEVNSASGIIDKGAERAQMAVSQTEQALTSLNSMVSQIEEISSQVTH 647

Query: 239 SAA---EQRTAIEEISLAIVEASEAANSVYDRAAQNAEGTKRVSAISALIAEHMAKFRT 294
            AA   EQ    EE++  I   S++A+ +   A +  + +  ++ +     + + K +T
Sbjct: 648 IAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQHQQLGKLKT 706