Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas fluorescens FW300-N2E2

 Score =  157 bits (397), Expect = 2e-43
 Identities = 81/236 (34%), Positives = 131/236 (55%), Gaps = 1/236 (0%)

Query: 8   LISVVLCSFSAWAQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWS 67
           LI ++L S+ A AQ +    D WPPF        GL+ DIV+ A A  GY  +F  +PW+
Sbjct: 10  LIGLLLLSYEACAQKLRLVADAWPPFTDSTLINGGLATDIVSTALARAGYATDFEQVPWA 69

Query: 68  RALNDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKK 127
           RA+  + EG+ D+L   W+++ERT    +S  YL N+V+FIK+  +  +F  L  L    
Sbjct: 70  RAMLGIGEGRYDVLVNAWYSEERTHIGQFSAEYLLNRVRFIKRKDETIQFDSLQQLRAYP 129

Query: 128 VGIVRGYGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIIT-EAGMN 186
           + +VRGY Y  +F  D    +    +    ++ L A R+ L +EDE VA+  +  E+   
Sbjct: 130 IAVVRGYAYSKDFDEDLQMQKVPVHNFAMAVRMLAADRVKLTLEDEYVARYYLARESAKV 189

Query: 187 LADFAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYGI 242
            +   F  + +SEN LH+     NP  E++VA F++ +A +KA+G++ +LL  +G+
Sbjct: 190 RSAVEFLPKPLSENSLHILVSLKNPEHEQIVAGFDREIAAMKADGSYARLLKAHGM 245