Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 241 a.a., periplasmic binding protein, putative from Pseudomonas fluorescens FW300-N2E2

 Score = 86.7 bits (213), Expect = 4e-22
 Identities = 66/228 (28%), Positives = 96/228 (42%), Gaps = 6/228 (2%)

Query: 17  SAWAQTITAAQDPWPPFVME-NAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKE 75
           +A A+ +    +PW P+V E N +  GL  +     F   G  VE+  +PW R L  +++
Sbjct: 2   TARAEKLRIVTEPWAPYVYEENGKMLGLDYETTAIVFKRLGIDVEWQFLPWKRCLVMLEQ 61

Query: 76  GKIDILPATWFTQERTAYLTYSDNYLTNQ--VKFIKKAGDNFEFAGLASLNGKKVGIVRG 133
           G  D     + + ER A L Y    L++   V F   A  +  F  L  L G  VG   G
Sbjct: 62  GLADGALDIFHSDERDAMLLYPSEPLSDVEFVMFYANARPH-PFRTLDDLRGLTVGTSPG 120

Query: 134 YGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNLADFAFT 193
           Y Y   F     F R  +   + N  KLQ GRIDL + D  V + ++    M L D    
Sbjct: 121 YLYSQAFSESTLFTRETAPTHEANFGKLQLGRIDLLITDRRVGRHVLEH--MQLGDQITE 178

Query: 194 NQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYG 241
           N  +        + + N   + LV  F+  L   K    + +L A YG
Sbjct: 179 NPMVVSRQSQYLAVRRNAGMDLLVQRFSAELKRFKREPAYAELSARYG 226