Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., ABC-type amino acid transport/signal transduction systems, periplasmic component/domain from Pseudomonas stutzeri RCH2

 Score =  111 bits (277), Expect = 2e-29
 Identities = 66/233 (28%), Positives = 117/233 (50%), Gaps = 2/233 (0%)

Query: 11  VVLCSFSAWAQTITAAQDPWPPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRAL 70
           ++L S S  A+ +  A + WPP+   +   +GLSV+++  A    GY VE+  +PW RAL
Sbjct: 50  LLLASASLPAEVLRLAGNLWPPYTDRSLPGEGLSVELIRTALGRGGYQVEYIEVPWERAL 109

Query: 71  NDVKEGKIDILPATWFTQERTAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKVGI 130
             +++G  D++   W   +R  Y   S  +L N+++++++ G    + GL SL G  + +
Sbjct: 110 LGLRKGSYDLVNG-WPAVKRVDYSLSSRAFLINRMRWVQRRGSGIRYDGLDSLTGYLLVL 168

Query: 131 VRGYGYGDEFMNDPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAK-SIITEAGMNLAD 189
            RGY Y DE   D    +  + +  Q    + AGR DL +EDE  A      E G     
Sbjct: 169 SRGYTYSDELDADTRLQKGYAANFVQAATMVLAGRADLTLEDERTALFHFERELGHERDA 228

Query: 190 FAFTNQAISENPLHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADYGI 242
            AF         L +   + +PR+ +++A FN+ +A + A+G++  +   + +
Sbjct: 229 LAFVPGEFRRVELSLLVRRDHPRATDIIATFNREIAAMLADGSYAAIFVRHAL 281