Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., Diaminopimelate-binding protein / L-cystine-binding protein from Pseudomonas syringae pv. syringae B728a

 Score = 60.5 bits (145), Expect = 3e-14
 Identities = 62/221 (28%), Positives = 97/221 (43%), Gaps = 22/221 (9%)

Query: 30  WPPF--VMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDI-LPATWF 86
           +PPF  V E+ +  G  V+   A     G   +     W   L  +   ++D+ +     
Sbjct: 50  YPPFSFVDESGKLTGFEVEFSEALAKELGVKAKIQPSKWDGILAALDSKRLDVVINQVTI 109

Query: 87  TQERTAYLTYSDNYLTN--QVKFIKKAGDNFEFAGLASLNGKKVGIVRGYGYGDEFM--N 142
           + ER     +S+ Y  +  Q   +KK  D  +   +  L+GKKVG+  G  Y +E++  N
Sbjct: 110 SDERKKKYDFSEPYTISGIQALVLKKNADTIK--SVKDLSGKKVGVGLGTNY-EEWLKAN 166

Query: 143 DPSFFRPESTDLKQNLQKLQAGRIDLAVEDELVAKSIITEAGMNL--ADFAFTNQAISEN 200
            P        D    +Q L  GRID  + D L A  +  +    L  A  AF+ QA    
Sbjct: 167 VPDAIVKTYDDDPSKIQDLSVGRIDAILVDRLAALEMAAKTKNKLVPAGEAFSRQA---- 222

Query: 201 PLHVTSGKANPRSE-ELVAAFNKGLAEIKANGTFDKLLADY 240
                SG A  + E EL+AA +K + +++A+GT  KL   Y
Sbjct: 223 -----SGIALRKGEPELLAAIDKAIDKLRADGTLKKLSEKY 258