Pairwise Alignments

Query, 243 a.a., amino acid ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., extracellular solute-binding protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 59.3 bits (142), Expect = 8e-14
 Identities = 56/219 (25%), Positives = 92/219 (42%), Gaps = 18/219 (8%)

Query: 31  PPFVMENAQQKGLSVDIVTAAFATQGYTVEFTIMPWSRALNDVKEGKIDILPATWFTQER 90
           PP+V++  +  GL +DI+  A A +G+      MP SR   ++K+GK+D +  T   +  
Sbjct: 36  PPYVIQQ-ENSGLELDILRQALARRGHYAVIHYMPLSRTFRELKDGKLDGIINT--KENM 92

Query: 91  TAYLTYSDNYLTNQVKFIKKAGDNFEFAGLASLNGKKV------GIVRGYGYGDEFMNDP 144
              + YSD  +      I  A  N +   +  L G  V        + G  +G      P
Sbjct: 93  LEGVFYSDEVIRFHNCVISLASRNLDINTIGDLKGMSVVAFQQASRILGEEFGSTVAKSP 152

Query: 145 SFFRPESTDLKQNLQKLQAGRIDLAVEDELV---AKSIITEAGMNLADFAFTNQAISENP 201
           S+   E    +  +  L  GR D+ V ++ +    +    EAG   A        I E  
Sbjct: 153 SY--SEIAAQRHQIHMLFKGRTDVIVMEKSIFAYYRKKELEAGFTEAGLEVREACIFE-- 208

Query: 202 LHVTSGKANPRSEELVAAFNKGLAEIKANGTFDKLLADY 240
              T+ +   RS  +   FN+GL+ I+ +GT   +L  Y
Sbjct: 209 --PTAYRFAFRSARIRDDFNQGLSSIREDGTLAAILQKY 245